You can be want to be seen as a woman but still have a penis.
Just because you're trans doesn't mean you have to have dysphoria regarding your penis and want to get rid of it, either. You can also have different situational feelings.
My reading was that Embry's pretty sub, so she probably doesn't like using her penis for penetrative intercourse, but she doesn't mind having one or having it touched and played with.
I sit corrected. I was looking at it from a fairly linear POV so I can completely get that it's not nearly cut or dried as I thought it was. I meant no disrespect.