It does not seem like it is intentional, and it can be a bit bothersome or distracting as incomplete quests appear in the tooltip of the Fly destinations
Maybe there could be a final step reporting to an NPC about it so a fix works with older saves, like talking with Ellie or Bit T. about it
Maybe there could be a final step reporting to an NPC about it so a fix works with older saves, like talking with Ellie or Bit T. about it